Journal: Signal Transduction and Targeted Therapy
Article Title: Tet methylcytosine dioxygenase 2 (TET2) deficiency elicits EGFR-TKI (tyrosine kinase inhibitors) resistance in non-small cell lung cancer
doi: 10.1038/s41392-024-01778-4
Figure Lengend Snippet: TET2 deficiency elicits the activation of TNF/NF-κB signaling. Kyoto Encyclopedia of Genes and Genomes pathway (KEGG) analyses of upregulated differential genes in HCC827-OR cells ( a ) and HCC827 TET2-KO ( b ) cells compared with HCC827 naïve cells. c Scatter plots to show the differential gene expression and the differential hypomethylated regions in gene body derived from integrated analysis of RNA-Seq and 5hmC-Seq data in HCC827 and HCC827 TET2-KO cells. d KEGG analyses of genes within differential hypomethylated regions in gene body in HCC827 TET2-KO cells, the gene sets analyzed are adapted from c shown in blue color. Enzyme-linked immunosorbent assay (ELISA) to measure the TNFα ( e ) and IL-6 ( f ) level in indicated cell lines. g IB analyses of pRelA S536 , RelA and IκBα in the cell lines described in ( f ). h ELISA to measure TNFα and IL-6 level in PC-9OR or HCC827-OR cells with or without TET2 S1107 overexpression. i IB analyses of pRelA S536 , RelA and IκBα in the cell lines described in ( h ). j Representative IHC staining of pMEK, TET2, and RelB in specimens from NSCLC patients and PDXs, which were resistant (Patient-1R, PDX-1R) or sensitive (Patient-1S, PDX-1S) to osimertinib treatment. Scale bars, 50 μm. P values were calculated using two-tailed unpaired Student’s t tests ( e , f , h ). Data in ( e – i ) are representative of two independent experiments. Data are shown as mean ± SEM
Article Snippet: Subsequently, sections were blocked with goat serum and incubated overnight with primary antibodies against pMEK (CST, #9154, 1:200), TET2 (CST, #18950, 1:100), or RelB (HuaBio, ET1612-18, 1:100).
Techniques: Activation Assay, Gene Expression, Derivative Assay, RNA Sequencing, Enzyme-linked Immunosorbent Assay, Over Expression, Immunohistochemistry, Two Tailed Test